Short talks 6 Evaluating the efficacy of methodologies for Deconvolution of transcriptional profiles: A benchmarking study Juggling with offsets unlocks bulk RNA-seq tools for fast and scalable differential usage and aberrant splicing analyses Neutralise: an open science initiative for neutral comparison of two-sample tests Data fission for post-clustering differential analysis using dearseq
Short talks 5 PredictIO: A Package For Meta-Analysis of Immunotherapy Clinical Trials in Cancer Access and use the European prediction service for biological data T.A.R.D.I.S.: Targeted Analysis and Raw Data Integration in Mass Spectrometry msqrob2PTM: differential abundance and differential usage analysis of MS-based proteomics data at the post-translational modification and peptidoform level Democratising Knowledge Representation with BioCypher Identification and analysis of gene and genome duplications with the doubletrouble Bioconductor package
Short talks 4 MoleculeExperiment enables consistent infrastructure for molecule-resolved spatial transcriptomics data A novel statistical method for single isoform proteogenomics inference
Short talks 3 Rarr: A native R reader for Zarr DESpace: a sensitive approach to discover spatially variable genes GeDi - Improving gene set distances accounting for network-based information
Short talks 2 Analysis of multi-condition single-cell data with latent embedding multivariate regression Differential detection workflows for multi-patient single-cell RNA-seq data Unraveling Immunogenomic Diversity in Single-Cell Data demuxSNP: supervised demultiplexing of scRNAseq data using cell hashing and SNPs COTAN v2: a Comprehensive and Versatile Framework for Single-Cell Gene Co-Expression Studies and Cell Type Identification Assessing differences in cell type/state abundance: compositionality, heteroscedasticity and bias
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